dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00556
Location and strand information: 280618 - 282513 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00557
Location and strand information: 282903 - 283478 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma-E factor

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00558
Location and strand information: 283608 - 284636 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00559
Location and strand information: 284796 - 288332 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00560
Location and strand information: 288367 - 290253 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00561
Location and strand information: 290198 - 290353 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00562
Location and strand information: 290483 - 292693 (+)
Family: GH89
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0596
Protein molecular weight: 84239.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00563
Location and strand information: 292877 - 293323 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00564
Location and strand information: 293385 - 294494 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_2|CGC5
Gene ID: MGYG000000196_00565
Location and strand information: 294616 - 297936 (-)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Protein translocase subunit SecA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000196_00556	Sensor histidine kinase RcsC	TC	280618	282513	+	2.A.21.9.2
MGYG000000196_00557	ECF RNA polymerase sigma-E factor	TF	282903	283478	-	GerE
MGYG000000196_00558	hypothetical protein	STP	283608	284636	+	FecR
MGYG000000196_00559	TonB-dependent receptor SusC	TC	284796	288332	+	1.B.14.6.1
MGYG000000196_00560	hypothetical protein	null	288367	290253	+	SusD-like_3\| SusD_RagB
MGYG000000196_00561	hypothetical protein	null	290198	290353	-	No domain
MGYG000000196_00562	hypothetical protein	CAZyme	290483	292693	+	GH89
MGYG000000196_00563	hypothetical protein	null	292877	293323	-	No domain
MGYG000000196_00564	hypothetical protein	null	293385	294494	-	DUF6340
MGYG000000196_00565	Protein translocase subunit SecA	TC	294616	297936	-	3.A.5.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature